Marinka Zitnik

Associate Professor@Harvard University·美国·OpenReview

研究方向

graph neural networks · knowledge graphs · computational biology · multimodal learning · representation learning · language models · pre-training · medicine and health · therapeutics and drug discovery · generative models · agents

Marinka Zitnik

Protein Structure Tokenization via Geometric Byte Pair Encoding

Greater than the Sum of Its Parts: Building Substructure into Protein Encoding Models

Repurposing Foundation Model for Generalizable Medical Time Series Classification

Controllable Sequence Editing for Biological and Clinical Trajectories

Prompting Decision Transformers for Zero-Shot Reach-Avoid Policies

SPATIA: Multimodal Model for Prediction and Generation of Spatial Cell Phenotypes

KnowGuard: Knowledge-Driven Abstention for Multi-Round Clinical Reasoning

PyTDC: A multimodal machine learning training, evaluation, and inference platform for biomedical foundation models

KGARevion: An AI Agent for Knowledge-Intensive Biomedical QA

Multimodal Medical Code Tokenizer

Evolutionary Reasoning Does Not Arise in Standard Usage of Protein Language Models

Composable Interventions for Language Models

Regularized Optimal Transport for Single-Cell Temporal Trajectory Analysis

Repurposing Foundation Model for Generalizable Medical Time Series Classification